Genomics information

Species Scientific Name UCSC Version Ensembl Genome Assembly GenBank assembly accession Chromosome Size Total #Ensembl Genes
Human Homo sapiens hg19 GRCh37.p13 GCA_000001405.14 3,326 Mbp 64,102
Mouse Mus musculus mm10 GRCm38.p2 GCA_000001635.4 3,482 Mbp 39,179
Rat Rattus norvegicus rn5 Rnor_5.0 GCA_000001895.3 2,909 Mbp 26,405
Chimpanzee Pan troglodytes panTro4 CHIMP2.1.4 GCA_000001515.4 2,995 Mbp 28,012
Chicken Gallus gallus galGal4 Galgal4 GCA_000002315.2 1,072 Mbp 17,108
Frog Xenopus tropicalis xenTro3 JGI 4.2 GCA_000004195.1 1,358 Mbp 19,921
Fruitfly Drosophila melanogaster dm3 BDGP5 GCA_000001215.1 168 Mbp 13,937
Yeast Saccharomyces cerevisiae sacCer3 R64-1-1 GCA_000146045.2 12 Mbp 7,126

RLFS statistics

Organism #predicted RLFS #RLFS in genic and proximal regions #merged RLFS in genic and proximal regions % RLFS on genic and proximal regions #RLFS in Upstream #RLFS in Gene #RLFS in Downstream
Human 664,791 511,651 169,222 76.96 207,282 464,019 118,082
Mouse 575,403 304,288 118,333 52.88 77,521 274,748 38,311
Rat 454,018 191,228 91,114 42.12 36,510 164,207 14,815
Chimpanzee 530,728 302,726 111,708 57.04 67,770 259,223 28,375
Chicken 213,942 146,292 47,326 68.38 55,502 111,537 29,113
Frog 319,296 104,939 25,910 32.87 20,474 11,642 80,662
Fruitfly 5,947 4,597 3,120 77.30 1,030 4,058 825
Yeast 78 74 33 94.87 70 22 45